Abstract:
A study was conducted to observe the prevalence of postharvest diseases of some
selected spices (onion, garlic, ginger and chilli) and to identify their causes in storage.
The experiment was conducted in the MS Laboratory of Department of Plant Pathology,
Faculty of Agriculture, Sher-e-Bangla Agricultural University during the period of
March, 2019- March, 2020. Spice samples were collected from five noted whole sale
markets of Dhaka and from farmers field of Faridpur district. During each visit one (1) kg
of samples of each spice was collected randomly from each of the market places. Sample
collection was carried out thrice. Diseased spice samples were sorted out. The most
frequent diseases found in the collected samples were black mould, blue mould, soft rot,
Fusarium dry rot, anthracnose etc. Pathogens were isolated by tissue planting method and
dilution plate method for fungi and bacteria, respectively. Several biochemical tests like
Gram’s staining, KOH solubility, starch hydrolysis, oxidase, catalase, motility, casein
hydrolysate, citrate utilization, lactose, sucrose, dextrose tests were conducted to identify
the bacteria isolated from collected samples. This study revealed that collected samples
were infected by Fusarium oxysporum causing Fusarium dry rot of ginger and chilli
(3.97%), Aspergillus niger causing black mould of onion and garlic (8%), Aspergillus
flavus causing green mould of onion (2%), Penicillium sp causing blue mould of onion
(5.90%), Colletotrichum capsici causing anthracnose of chilli (3.5%), Bacillus subtilis
causing soft rot of onion (3.68%), Pseudomonas aeruginosa causing soft rot of garlic
(5%), Pseudomonas geniculata causing soft rot of ginger (3%), Serratia marcesens
causing soft rot of garlic (3%). Identification of the bacteria was confirmed by extracting
DNA from the bacterial cultures. The DNA samples were subjected to PCR using primer
27F: AGA GTT TGA TCM TGG CTC AG and primer 1492 R: CGG TTA CCT TGT
TAC GAC TT, which produced around 1465-bp amplicons that were purified and
sequenced using the same primers. DNA sequences of D1/D2 domain of 16s rDNA
sequences of isolated bacteria were submitted to National Center for Biotechnology
Information (NCBI) for deposition in the GenBank and obtain accession number. The
obtained accession no. MW404211 for Pseudomonas aeruginosa strain SAU-2, accession
no. MW404212 for Pseudomonas geniculata strain SAU-3, accession no. MW404213 for
Serratia marcescens strain SAU-4. However, further research needed to conduct to
observe the diversity of the postharvest diseases of spices for the potential control of
postharvest diseases of spices. Spices can store in paper bag up to 30 days at average
29
Description:
A Thesis Submitted to the Department of Plant Pathology
Sher-e-Bangla Agricultural University, Dhaka
In Partial Fulfillment of the Requirements for the Degree of
MASTER OF SCIENCE (M.S.)
IN
PLANT PATHOLOGY